2014
|
Chen, Andrew; Li, Chengxia; Hu, Wei; Lau, Mei Yee; Lin, Huiqiong; Rockwell, Nathan C; Martin, Shelley S; Jernstedt, Judith A; Lagarias, John Clark; Dubcovsky, Jorge PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod Journal Article Proceedings of the National Academy of Sciences of the United States of America, 111 (28), pp. 10037-10044, 2014. BibTeX @article{RID:0820141112359-150b,
title = {PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod},
author = {Andrew Chen and Chengxia Li and Wei Hu and Mei Yee Lau and Huiqiong Lin and Nathan C Rockwell and Shelley S Martin and Judith A Jernstedt and John Clark Lagarias and Jorge Dubcovsky},
year = {2014},
date = {2014-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {111},
number = {28},
pages = {10037-10044},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Lim, Sunghyuk; Rockwell, Nathan C; Martin, Shelley S; Dallas, Jerry L; Lagarias, John Clark; Ames, James B Photoconversion changes bilin chromophore conjugation and protein secondary structure in the violet/orange cyanobacteriochrome NpF2163g3 Journal Article Photochemical & Photobiological Sciences, 13 (6), pp. 951-962, 2014. BibTeX @article{RID:0820141112360-146b,
title = {Photoconversion changes bilin chromophore conjugation and protein secondary structure in the violet/orange cyanobacteriochrome NpF2163g3},
author = {Sunghyuk Lim and Nathan C Rockwell and Shelley S Martin and Jerry L Dallas and John Clark Lagarias and James B Ames},
year = {2014},
date = {2014-01-01},
journal = {Photochemical & Photobiological Sciences},
volume = {13},
number = {6},
pages = {951-962},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Lim, Sunghyuk; Rockwell, Nathan C; Martin, Shelley S; Dallas, Jerry L; Lagarias, John Clark; Ames, James B Photoconversion changes bilin chromophore conjugation and protein secondary structure in the violet/orange cyanobacteriochrome NpF2163g3 (vol 13, pg 951, 2014) Journal Article Photochemical & Photobiological Sciences, 13 (9), pp. 1360, 2014. BibTeX @article{RID:1020161734887-170b,
title = {Photoconversion changes bilin chromophore conjugation and protein secondary structure in the violet/orange cyanobacteriochrome NpF2163g3 (vol 13, pg 951, 2014)},
author = {Sunghyuk Lim and Nathan C Rockwell and Shelley S Martin and Jerry L Dallas and John Clark Lagarias and James B Ames},
year = {2014},
date = {2014-01-01},
journal = {Photochemical & Photobiological Sciences},
volume = {13},
number = {9},
pages = {1360},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Gottlieb, Sean M; Kim, Peter W; Corley, Scott C; Madsen, Dorte; Hanke, Samuel J; Chang, Che-Wei; Rockwell, Nathan C; Martin, Shelley S; Lagarias, John Clark; Larsen, Delmar S Primary and secondary photodynamics of the violet/orange dual-cysteine NpF2164g3 cyanobacteriochrome domain from Nostoc punctiforme Journal Article Biochemistry, 53 (6), pp. 1029-1040, 2014. BibTeX @article{RID:0403141802598-142b,
title = {Primary and secondary photodynamics of the violet/orange dual-cysteine NpF2164g3 cyanobacteriochrome domain from Nostoc punctiforme},
author = {Sean M Gottlieb and Peter W Kim and Scott C Corley and Dorte Madsen and Samuel J Hanke and Che-Wei Chang and Nathan C Rockwell and Shelley S Martin and John Clark Lagarias and Delmar S Larsen},
year = {2014},
date = {2014-01-01},
journal = {Biochemistry},
volume = {53},
number = {6},
pages = {1029-1040},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2013
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Hirose, Y; Rockwell, N C; Nishiyama, K; Narikawa, R; Ukaji, Y; Inomata, K; Lagarias, J C; Ikeuchi, M Green/red cyanobacteriochromes regulate complementary chromatic acclimation via a protochromic photocycle Journal Article Proceedings of the National Academy of Sciences of the United States of America, 110 (13), pp. 4974-4979, 2013. BibTeX @article{RID:121913175250-4b,
title = {Green/red cyanobacteriochromes regulate complementary chromatic acclimation via a protochromic photocycle},
author = {Y Hirose and N C Rockwell and K Nishiyama and R Narikawa and Y Ukaji and K Inomata and J C Lagarias and M Ikeuchi},
year = {2013},
date = {2013-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {110},
number = {13},
pages = {4974-4979},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Kabasakal, B V; Gae, D D; Li, J; Lagarias, J C; Koehl, P; Fisher, A J His74 conservation in the bilin reductase PcyA family reflects an important role in protein-substrate structure and dynamics Journal Article Archives of Biochemistry and Biophysics, 537 (2), pp. 233-242, 2013. BibTeX @article{RID:121913175250-20b,
title = {His74 conservation in the bilin reductase PcyA family reflects an important role in protein-substrate structure and dynamics},
author = {B V Kabasakal and D D Gae and J Li and J C Lagarias and P Koehl and A J Fisher},
year = {2013},
date = {2013-01-01},
journal = {Archives of Biochemistry and Biophysics},
volume = {537},
number = {2},
pages = {233-242},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Gottlieb, Sean M; Kim, Peter W; Rockwell, Nathan C; Hirose, Yuu; Ikeuchi, Masahiko; Lagarias, John Clark; Larsen, Delmar S Primary photodynamics of the green/red-absorbing photoswitching regulator of the chromatic adaptation E domain from Fremyella diplosiphon Journal Article Biochemistry, 52 (46), pp. 8198-8208, 2013. BibTeX @article{RID:121913175251-127b,
title = {Primary photodynamics of the green/red-absorbing photoswitching regulator of the chromatic adaptation E domain from Fremyella diplosiphon},
author = {Sean M Gottlieb and Peter W Kim and Nathan C Rockwell and Yuu Hirose and Masahiko Ikeuchi and John Clark Lagarias and Delmar S Larsen},
year = {2013},
date = {2013-01-01},
journal = {Biochemistry},
volume = {52},
number = {46},
pages = {8198-8208},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Duanmu, D; Casero, D; Dent, R M; Gallaher, S; Yang, W Q; Rockwell, N C; Martin, S S; Pellegrini, M; Niyogi, K K; Merchant, S S; Grossman, A R; Lagarias, J C Retrograde bilin signaling enables Chlamydomonas greening and phototrophic survival Journal Article Proceedings of the National Academy of Sciences of the United States of America, 110 (9), pp. 3621-3626, 2013. BibTeX @article{RID:121913175251-93b,
title = {Retrograde bilin signaling enables Chlamydomonas greening and phototrophic survival},
author = {D Duanmu and D Casero and R M Dent and S Gallaher and W Q Yang and N C Rockwell and S S Martin and M Pellegrini and K K Niyogi and S S Merchant and A R Grossman and J C Lagarias},
year = {2013},
date = {2013-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {110},
number = {9},
pages = {3621-3626},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Hu, W; Franklin, K A; Sharrock, R A; Jones, M A; Harmer, S L; Lagarias, J C Unanticipated regulatory roles for Arabidopsis phytochromes revealed by null mutant analysis Journal Article Proceedings of the National Academy of Sciences of the United States of America, 110 (4), pp. 1542-1547, 2013. BibTeX @article{RID:121913175251-73b,
title = {Unanticipated regulatory roles for Arabidopsis phytochromes revealed by null mutant analysis},
author = {W Hu and K A Franklin and R A Sharrock and M A Jones and S L Harmer and J C Lagarias},
year = {2013},
date = {2013-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {110},
number = {4},
pages = {1542-1547},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Kim, P W; Rockwell, N C; Freer, L H; Chang, C W; Martin, S S; Lagarias, J C; Larsen, D S Unraveling the Primary Isomerization Dynamics in Cyanobacterial Phytochrome Cph1 with Multipulse Manipulations Journal Article Journal of Physical Chemistry Letters, 4 (16), pp. 2605-2609, 2013. BibTeX @article{RID:121913175251-113b,
title = {Unraveling the Primary Isomerization Dynamics in Cyanobacterial Phytochrome Cph1 with Multipulse Manipulations},
author = {P W Kim and N C Rockwell and L H Freer and C W Chang and S S Martin and J C Lagarias and D S Larsen},
year = {2013},
date = {2013-01-01},
journal = {Journal of Physical Chemistry Letters},
volume = {4},
number = {16},
pages = {2605-2609},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2012
|
Kim, P W; Freer, L H; Rockwell, N C; Martin, S S; Lagarias, J C; Larsen, D S Second-Chance Forward Isomerization Dynamics of the Red/Green Cyanobacteriochrome NpR6012g4 from Nostoc punctiforme Journal Article Journal of the American Chemical Society, 134 (1), pp. 130-133, 2012. BibTeX @article{RID:121913175252-112,
title = {Second-Chance Forward Isomerization Dynamics of the Red/Green Cyanobacteriochrome NpR6012g4 from Nostoc punctiforme},
author = {P W Kim and L H Freer and N C Rockwell and S S Martin and J C Lagarias and D S Larsen},
year = {2012},
date = {2012-01-01},
journal = {Journal of the American Chemical Society},
volume = {134},
number = {1},
pages = {130-133},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Freer, L H; Kim, P W; Corley, S C; Rockwell, N C; Zhao, L; Thibert, A J; Lagarias, J C; Larsen, D S Chemical Inhomogeneity in the Ultrafast Dynamics of the DXCF Cyanobacteriochrome Tlr0924 Journal Article Journal of Physical Chemistry B, 116 (35), pp. 10571-10581, 2012. BibTeX @article{RID:121913175251-42b,
title = {Chemical Inhomogeneity in the Ultrafast Dynamics of the DXCF Cyanobacteriochrome Tlr0924},
author = {L H Freer and P W Kim and S C Corley and N C Rockwell and L Zhao and A J Thibert and J C Lagarias and D S Larsen},
year = {2012},
date = {2012-01-01},
journal = {Journal of Physical Chemistry B},
volume = {116},
number = {35},
pages = {10571-10581},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Kim, P W; Freer, L H; Rockwell, N C; Martin, S S; Lagarias, J C; Larsen, D S Femtosecond Photodynamics of the Red/Green Cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 1. Forward Dynamics Journal Article Biochemistry, 51 (2), pp. 608-618, 2012. BibTeX @article{RID:121913175251-63b,
title = {Femtosecond Photodynamics of the Red/Green Cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 1. Forward Dynamics},
author = {P W Kim and L H Freer and N C Rockwell and S S Martin and J C Lagarias and D S Larsen},
year = {2012},
date = {2012-01-01},
journal = {Biochemistry},
volume = {51},
number = {2},
pages = {608-618},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Kim, P W; Freer, L H; Rockwell, N C; Martin, S S; Lagarias, J C; Larsen, D S Femtosecond Photodynamics of the Red/Green Cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 2. Reverse Dynamics Journal Article Biochemistry, 51 (2), pp. 619-630, 2012. BibTeX @article{RID:121913175251-56b,
title = {Femtosecond Photodynamics of the Red/Green Cyanobacteriochrome NpR6012g4 from Nostoc punctiforme. 2. Reverse Dynamics},
author = {P W Kim and L H Freer and N C Rockwell and S S Martin and J C Lagarias and D S Larsen},
year = {2012},
date = {2012-01-01},
journal = {Biochemistry},
volume = {51},
number = {2},
pages = {619-630},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Rockwell, N C; Martin, S S; Lagarias, J C Mechanistic Insight into the Photosensory Versatility of DXCF Cyanobacteriochromes Journal Article Biochemistry, 51 (17), pp. 3576-3585, 2012. BibTeX @article{RID:121913175252-115b,
title = {Mechanistic Insight into the Photosensory Versatility of DXCF Cyanobacteriochromes},
author = {N C Rockwell and S S Martin and J C Lagarias},
year = {2012},
date = {2012-01-01},
journal = {Biochemistry},
volume = {51},
number = {17},
pages = {3576-3585},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Rockwell, N C; Martin, S S; Gulevich, A G; Lagarias, J C Phycoviolobilin Formation and Spectral Tuning in the DXCF Cyanobacteriochrome Subfamily Journal Article Biochemistry, 51 (7), pp. 1449-1463, 2012. BibTeX @article{RID:121913175252-114b,
title = {Phycoviolobilin Formation and Spectral Tuning in the DXCF Cyanobacteriochrome Subfamily},
author = {N C Rockwell and S S Martin and A G Gulevich and J C Lagarias},
year = {2012},
date = {2012-01-01},
journal = {Biochemistry},
volume = {51},
number = {7},
pages = {1449-1463},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Park, E; Park, J; Kim, J; Nagatani, A; Lagarias, J C; Choi, G Phytochrome B inhibits binding of phytochrome-interacting factors to their target promoters Journal Article Plant Journal, 72 (4), pp. 537-546, 2012. BibTeX @article{RID:121913175252-80b,
title = {Phytochrome B inhibits binding of phytochrome-interacting factors to their target promoters},
author = {E Park and J Park and J Kim and A Nagatani and J C Lagarias and G Choi},
year = {2012},
date = {2012-01-01},
journal = {Plant Journal},
volume = {72},
number = {4},
pages = {537-546},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Kim, P W; Freer, L H; Rockwell, N C; Martin, S S; Lagarias, J C; Larsen, D S Second-Chance Forward Isomerization Dynamics of the Red/Green Cyanobacteriochrome NpR6012g4 from Nostoc punctiforme Journal Article Journal of the American Chemical Society, 134 (1), pp. 130-133, 2012. BibTeX @article{RID:121913175252-112b,
title = {Second-Chance Forward Isomerization Dynamics of the Red/Green Cyanobacteriochrome NpR6012g4 from Nostoc punctiforme},
author = {P W Kim and L H Freer and N C Rockwell and S S Martin and J C Lagarias and D S Larsen},
year = {2012},
date = {2012-01-01},
journal = {Journal of the American Chemical Society},
volume = {134},
number = {1},
pages = {130-133},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Kim, P W; Pan, J; Rockwell, N C; Chang, C W; Taylor, K C; Lagarias, J C; Larsen, D S Ultrafast E to Z photoisomerization dynamics of the Cph1 phytochrome Journal Article Chemical Physics Letters, 549 , pp. 86-92, 2012. BibTeX @article{RID:121913175252-81b,
title = {Ultrafast E to Z photoisomerization dynamics of the Cph1 phytochrome},
author = {P W Kim and J Pan and N C Rockwell and C W Chang and K C Taylor and J C Lagarias and D S Larsen},
year = {2012},
date = {2012-01-01},
journal = {Chemical Physics Letters},
volume = {549},
pages = {86-92},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2011
|
Rockwell, N C; Martin, S S; Feoktistova, K; Lagarias, J C Diverse two-cysteine photocycles in phytochromes and cyanobacteriochromes Journal Article Proceedings of the National Academy of Sciences of the United States of America, 108 (29), pp. 11854-11859, 2011. BibTeX @article{RID:121913175252-120b,
title = {Diverse two-cysteine photocycles in phytochromes and cyanobacteriochromes},
author = {N C Rockwell and S S Martin and K Feoktistova and J C Lagarias},
year = {2011},
date = {2011-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {108},
number = {29},
pages = {11854-11859},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Song, J Y; Cho, H S; Cho, J I; Jeon, J S; Lagarias, J C; Park, Y I Near-UV cyanobacteriochrome signaling system elicits negative phototaxis in the cyanobacterium Synechocystis sp PCC 6803 Journal Article Proceedings of the National Academy of Sciences of the United States of America, 108 (26), pp. 10780-10785, 2011. BibTeX @article{RID:121913175252-118b,
title = {Near-UV cyanobacteriochrome signaling system elicits negative phototaxis in the cyanobacterium Synechocystis sp PCC 6803},
author = {J Y Song and H S Cho and J I Cho and J S Jeon and J C Lagarias and Y I Park},
year = {2011},
date = {2011-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {108},
number = {26},
pages = {10780-10785},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2010
|
Rockwell, N C; Lagarias, J C A Brief History of Phytochromes Journal Article Chemphyschem, 11 (6), pp. 1172-1180, 2010. BibTeX @article{RID:121913175253-31b,
title = {A Brief History of Phytochromes},
author = {N C Rockwell and J C Lagarias},
year = {2010},
date = {2010-01-01},
journal = {Chemphyschem},
volume = {11},
number = {6},
pages = {1172-1180},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Shang, L X; Rockwell, N C; Martin, S S; Lagarias, J C Biliverdin Amides Reveal Roles for Propionate Side Chains in Bilin Reductase Recognition and in Holophytochrome Assembly and Photoconversion Journal Article Biochemistry, 49 (29), pp. 6070-6082, 2010. BibTeX @article{RID:121913175253-55b,
title = {Biliverdin Amides Reveal Roles for Propionate Side Chains in Bilin Reductase Recognition and in Holophytochrome Assembly and Photoconversion},
author = {L X Shang and N C Rockwell and S S Martin and J C Lagarias},
year = {2010},
date = {2010-01-01},
journal = {Biochemistry},
volume = {49},
number = {29},
pages = {6070-6082},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Kohler, A C; Gae, D D; Richley, M A; Stoll, S; Gunn, A; Lim, S; Martin, S S; Doukov, T I; Britt, R D; Ames, J B; Lagarias, J C; Fisher, A J Structural Basis for Hydration Dynamics in Radical Stabilization of Bilin Reductase Mutants Journal Article Biochemistry, 49 (29), pp. 6206-6218, 2010. BibTeX @article{RID:121913175253-44b,
title = {Structural Basis for Hydration Dynamics in Radical Stabilization of Bilin Reductase Mutants},
author = {A C Kohler and D D Gae and M A Richley and S Stoll and A Gunn and S Lim and S S Martin and T I Doukov and R D Britt and J B Ames and J C Lagarias and A J Fisher},
year = {2010},
date = {2010-01-01},
journal = {Biochemistry},
volume = {49},
number = {29},
pages = {6206-6218},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Hagiwara, Y; Sugishima, M; Khawn, H; Kinoshita, H; Inomata, K; Shang, L X; Lagarias, J C; Takahashi, Y; Fukuyama, K Structural Insights into Vinyl Reduction Regiospecificity of Phycocyanobilin:Ferredoxin Oxidoreductase (PcyA) Journal Article Journal of Biological Chemistry, 285 (2), pp. 1000-1007, 2010. BibTeX @article{RID:121913175253-40b,
title = {Structural Insights into Vinyl Reduction Regiospecificity of Phycocyanobilin:Ferredoxin Oxidoreductase (PcyA)},
author = {Y Hagiwara and M Sugishima and H Khawn and H Kinoshita and K Inomata and L X Shang and J C Lagarias and Y Takahashi and K Fukuyama},
year = {2010},
date = {2010-01-01},
journal = {Journal of Biological Chemistry},
volume = {285},
number = {2},
pages = {1000-1007},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2009
|
Hu, W; Su, Y S; Lagarias, J C A Light-Independent Allele of Phytochrome B Faithfully Recapitulates Photomorphogenic Transcriptional Networks Journal Article Molecular Plant, 2 (1), pp. 166-182, 2009. BibTeX @article{RID:121913175253-23b,
title = {A Light-Independent Allele of Phytochrome B Faithfully Recapitulates Photomorphogenic Transcriptional Networks},
author = {W Hu and Y S Su and J C Lagarias},
year = {2009},
date = {2009-01-01},
journal = {Molecular Plant},
volume = {2},
number = {1},
pages = {166-182},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Rockwell, N C; Shang, L; Martin, S S; Lagarias, J C Distinct classes of red/far-red photochemistry within the phytochrome superfamily Journal Article Proceedings of the National Academy of Sciences of the United States of America, 106 (15), pp. 6123-6127, 2009. BibTeX @article{RID:121913175253-37b,
title = {Distinct classes of red/far-red photochemistry within the phytochrome superfamily},
author = {N C Rockwell and L Shang and S S Martin and J C Lagarias},
year = {2009},
date = {2009-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {106},
number = {15},
pages = {6123-6127},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Spillane, K M; Dasgupta, J; Lagarias, J C; Mathies, R A Homogeneity of Phytochrome Cph1 Vibronic Absorption Revealed by Resonance Raman Intensity Analysis Journal Article Journal of the American Chemical Society, 131 (39), pp. 13946-+, 2009. BibTeX @article{RID:121913175254-121b,
title = {Homogeneity of Phytochrome Cph1 Vibronic Absorption Revealed by Resonance Raman Intensity Analysis},
author = {K M Spillane and J Dasgupta and J C Lagarias and R A Mathies},
year = {2009},
date = {2009-01-01},
journal = {Journal of the American Chemical Society},
volume = {131},
number = {39},
pages = {13946-+},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Stoll, S; Gunn, A; Brynda, M; Sughrue, W; Kohler, A C; Ozarowski, A; Fisher, A J; Lagarias, J C; Britt, R D Structure of the Biliverdin Radical Intermediate in Phycocyanobilin:Ferredoxin Oxidoreductase Identified by High-Field EPR and DFT Journal Article Journal of the American Chemical Society, 131 (5), pp. 1986-1995, 2009. BibTeX @article{RID:121913175254-72b,
title = {Structure of the Biliverdin Radical Intermediate in Phycocyanobilin:Ferredoxin Oxidoreductase Identified by High-Field EPR and DFT},
author = {S Stoll and A Gunn and M Brynda and W Sughrue and A C Kohler and A Ozarowski and A J Fisher and J C Lagarias and R D Britt},
year = {2009},
date = {2009-01-01},
journal = {Journal of the American Chemical Society},
volume = {131},
number = {5},
pages = {1986-1995},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Dasgupta, J; Frontiera, R R; Taylor, K C; Lagarias, J C; Mathies, R A Ultrafast excited-state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy Journal Article Proceedings of the National Academy of Sciences of the United States of America, 106 (6), pp. 1784-1789, 2009. BibTeX @article{RID:121913175254-1e,
title = {Ultrafast excited-state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy},
author = {J Dasgupta and R R Frontiera and K C Taylor and J C Lagarias and R A Mathies},
year = {2009},
date = {2009-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {106},
number = {6},
pages = {1784-1789},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2008
|
Rockwell, N C; Njuguna, S L; Roberts, L; Castillo, E; Parson, V L; Dwojak, S; Lagarias, J C; Spiller, S C A second conserved GAF domain cysteine is required for the blue/green photoreversibility of cyanobacteriochrome Tlr0924 from Thermosynechococcus elongatus Journal Article Biochemistry, 47 (27), pp. 7304-7316, 2008. BibTeX @article{RID:121913175254-85b,
title = {A second conserved GAF domain cysteine is required for the blue/green photoreversibility of cyanobacteriochrome Tlr0924 from Thermosynechococcus elongatus},
author = {N C Rockwell and S L Njuguna and L Roberts and E Castillo and V L Parson and S Dwojak and J C Lagarias and S C Spiller},
year = {2008},
date = {2008-01-01},
journal = {Biochemistry},
volume = {47},
number = {27},
pages = {7304-7316},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Dasgupta, J; Frontiera, R; Taylor, K C; Lagarias, J C; Mathies, R A PHYS 8-Ultrafast excited state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy Journal Article Abstracts of Papers of the American Chemical Society, 236 , 2008. BibTeX @article{RID:121913175254-122b,
title = {PHYS 8-Ultrafast excited state isomerization in phytochrome revealed by femtosecond stimulated Raman spectroscopy},
author = {J Dasgupta and R Frontiera and K C Taylor and J C Lagarias and R A Mathies},
year = {2008},
date = {2008-01-01},
journal = {Abstracts of Papers of the American Chemical Society},
volume = {236},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2007
|
Tu, S L; Rockwell, N C; Lagarias, J C; Fisher, A J Insight into the radical mechanism of phycocyanobilin-ferredoxin oxidoreductase (PcyA) revealed by X-ray crystallography and biochemical measurements Journal Article Biochemistry, 46 (6), pp. 1484-1494, 2007. BibTeX @article{RID:121913175254-60b,
title = {Insight into the radical mechanism of phycocyanobilin-ferredoxin oxidoreductase (PcyA) revealed by X-ray crystallography and biochemical measurements},
author = {S L Tu and N C Rockwell and J C Lagarias and A J Fisher},
year = {2007},
date = {2007-01-01},
journal = {Biochemistry},
volume = {46},
number = {6},
pages = {1484-1494},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Su, Y S; Lagarias, J C Light-independent phytochrome signaling mediated by dominant GAF domain tyrosine mutants of Arabidopsis phytochromes in transgenic plants Journal Article Plant Cell, 19 (7), pp. 2124-2139, 2007. BibTeX @article{RID:121913175254-74b,
title = {Light-independent phytochrome signaling mediated by dominant GAF domain tyrosine mutants of Arabidopsis phytochromes in transgenic plants},
author = {Y S Su and J C Lagarias},
year = {2007},
date = {2007-01-01},
journal = {Plant Cell},
volume = {19},
number = {7},
pages = {2124-2139},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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Su, Y S; Lagarias, J C Light-independent phytochrome signaling mediated by dominant GAF domain tyrosine mutants of Arabidopsis phytochromes in transgenic plants. (vol 19, pg 2124, 2007) Journal Article Plant Cell, 19 (8), pp. 2693-2694, 2007. BibTeX @article{RID:121913175255-123b,
title = {Light-independent phytochrome signaling mediated by dominant GAF domain tyrosine mutants of Arabidopsis phytochromes in transgenic plants. (vol 19, pg 2124, 2007)},
author = {Y S Su and J C Lagarias},
year = {2007},
date = {2007-01-01},
journal = {Plant Cell},
volume = {19},
number = {8},
pages = {2693-2694},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Rockwell, N C; Lagarias, J C Flexible mapping of homology onto structure with homolmapper Journal Article BMC Bioinformatics, 8 , pp. 1-13, 2007. BibTeX @article{RID:121913175254-58b,
title = {Flexible mapping of homology onto structure with homolmapper},
author = {N C Rockwell and J C Lagarias},
year = {2007},
date = {2007-01-01},
journal = {BMC Bioinformatics},
volume = {8},
pages = {1-13},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
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2006
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Tu, S L; Sughrue, W; Britt, R D; Lagarias, J C A conserved histidine-aspartate pair is required for exovinyl reduction of biliverdin by a cyanobacterial phycocyanobilin : ferredoxin oxidoreductase Journal Article Journal of Biological Chemistry, 281 (6), pp. 3127-3136, 2006. BibTeX @article{RID:121913175255-61b,
title = {A conserved histidine-aspartate pair is required for exovinyl reduction of biliverdin by a cyanobacterial phycocyanobilin : ferredoxin oxidoreductase},
author = {S L Tu and W Sughrue and R D Britt and J C Lagarias},
year = {2006},
date = {2006-01-01},
journal = {Journal of Biological Chemistry},
volume = {281},
number = {6},
pages = {3127-3136},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Rockwell, N C; Su, Y S; Lagarias, J C Phytochrome structure and signaling mechanisms Book Chapter Annual Review of Plant Biology, 57 , pp. 837-858, 2006. BibTeX @inbook{RID:121913175255-96b,
title = {Phytochrome structure and signaling mechanisms},
author = {N C Rockwell and Y S Su and J C Lagarias},
year = {2006},
date = {2006-01-01},
booktitle = {Annual Review of Plant Biology},
volume = {57},
pages = {837-858},
series = {Annual Review of Plant Biology},
keywords = {},
pubstate = {published},
tppubtype = {inbook}
}
|
Miller, A E; Fischer, A J; Laurence, T; Hollars, C W; Saykally, R J; Lagarias, J C; Huser, T Single-molecule dynamics of phytochrome-bound fluorophores probed by fluorescence correlation spectroscopy Journal Article Proceedings of the National Academy of Sciences of the United States of America, 103 (30), pp. 11136-11141, 2006. BibTeX @article{RID:121913175255-53b,
title = {Single-molecule dynamics of phytochrome-bound fluorophores probed by fluorescence correlation spectroscopy},
author = {A E Miller and A J Fischer and T Laurence and C W Hollars and R J Saykally and J C Lagarias and T Huser},
year = {2006},
date = {2006-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {103},
number = {30},
pages = {11136-11141},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Rockwell, N C; Lagarias, J C The structure of phytochrome: A picture is worth a thousand spectra Journal Article Plant Cell, 18 (1), pp. 4-14, 2006. BibTeX @article{RID:121913175255-47b,
title = {The structure of phytochrome: A picture is worth a thousand spectra},
author = {N C Rockwell and J C Lagarias},
year = {2006},
date = {2006-01-01},
journal = {Plant Cell},
volume = {18},
number = {1},
pages = {4-14},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2005
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Miller, A E; Fischer, A J; Hollars, C W; Saykally, R J; Huser, T R; Lagarias, J C Fluorescence correlation spectroscopic analysis of the monomer/dimer equilibrium of a red fluorescent mutant of Cph1 Journal Article Abstracts of Papers of the American Chemical Society, 229 , pp. U780, 2005. BibTeX @article{RID:121913175255-54b,
title = {Fluorescence correlation spectroscopic analysis of the monomer/dimer equilibrium of a red fluorescent mutant of Cph1},
author = {A E Miller and A J Fischer and C W Hollars and R J Saykally and T R Huser and J C Lagarias},
year = {2005},
date = {2005-01-01},
journal = {Abstracts of Papers of the American Chemical Society},
volume = {229},
pages = {U780},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Fischer, A J; Rockwell, N C; Jang, A Y; Ernst, L A; Waggoner, A S; Duan, Y; Lei, H X; Lagarias, J C Multiple roles of a conserved GAF domain tyrosine residue in cyanobacterial and plant phytochromes Journal Article Biochemistry, 44 (46), pp. 15203-15215, 2005. BibTeX @article{RID:121913175256-36b,
title = {Multiple roles of a conserved GAF domain tyrosine residue in cyanobacterial and plant phytochromes},
author = {A J Fischer and N C Rockwell and A Y Jang and L A Ernst and A S Waggoner and Y Duan and H X Lei and J C Lagarias},
year = {2005},
date = {2005-01-01},
journal = {Biochemistry},
volume = {44},
number = {46},
pages = {15203-15215},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2004
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Tu, S L; Gunn, A; Toney, M D; Britt, R D; Lagarias, J C Biliverdin reduction by cyanobacterial phycocyanobilin : ferredoxin oxidoreductase (PcyA) proceeds via linear tetrapyrrole radical intermediates Journal Article Journal of the American Chemical Society, 126 (28), pp. 8682-8693, 2004. BibTeX @article{RID:121913175256-17b,
title = {Biliverdin reduction by cyanobacterial phycocyanobilin : ferredoxin oxidoreductase (PcyA) proceeds via linear tetrapyrrole radical intermediates},
author = {S L Tu and A Gunn and M D Toney and R D Britt and J C Lagarias},
year = {2004},
date = {2004-01-01},
journal = {Journal of the American Chemical Society},
volume = {126},
number = {28},
pages = {8682-8693},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Kami, C; Mukougawa, K; Muramoto, T; Yokota, A; Shinomura, T; Lagarias, J C; Kohchi, T Complementation of phytochrome chromophore-deficient Arabidopsis by expression of phycocyanobilin : ferredoxin oxidoreductase Journal Article Proceedings of the National Academy of Sciences of the United States of America, 101 (4), pp. 1099-1104, 2004. BibTeX @article{RID:121913175256-6b,
title = {Complementation of phytochrome chromophore-deficient Arabidopsis by expression of phycocyanobilin : ferredoxin oxidoreductase},
author = {C Kami and K Mukougawa and T Muramoto and A Yokota and T Shinomura and J C Lagarias and T Kohchi},
year = {2004},
date = {2004-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {101},
number = {4},
pages = {1099-1104},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Fischer, A J; Lagarias, J C Harnessing phytochrome's glowing potential Journal Article Proceedings of the National Academy of Sciences of the United States of America, 101 (50), pp. 17334-17339, 2004. BibTeX @article{RID:121913175256-26b,
title = {Harnessing phytochrome's glowing potential},
author = {A J Fischer and J C Lagarias},
year = {2004},
date = {2004-01-01},
journal = {Proceedings of the National Academy of Sciences of the United States of America},
volume = {101},
number = {50},
pages = {17334-17339},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Kami, C; Mukougawa, K; Muramoto, T; Iwata, N; Kobayashi, T; Yokota, A; Shinomura, T; Lagarias, J C; Kohchi, T Light responses of Arabidopsis having phycocyanobilin as phytochromre chromophore Journal Article Plant and Cell Physiology, 45 , pp. S45, 2004. BibTeX @article{RID:121913175256-12b,
title = {Light responses of Arabidopsis having phycocyanobilin as phytochromre chromophore},
author = {C Kami and K Mukougawa and T Muramoto and N Iwata and T Kobayashi and A Yokota and T Shinomura and J C Lagarias and T Kohchi},
year = {2004},
date = {2004-01-01},
journal = {Plant and Cell Physiology},
volume = {45},
pages = {S45},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Terauchi, K; Montgomery, B L; Grossman, A R; Lagarias, J C; Kehoe, D M RcaE is a complementary chromatic adaptation photoreceptor required for green and red light responsiveness Journal Article Molecular Microbiology, 51 (2), pp. 567-577, 2004. BibTeX @article{RID:121913175256-97b,
title = {RcaE is a complementary chromatic adaptation photoreceptor required for green and red light responsiveness},
author = {K Terauchi and B L Montgomery and A R Grossman and J C Lagarias and D M Kehoe},
year = {2004},
date = {2004-01-01},
journal = {Molecular Microbiology},
volume = {51},
number = {2},
pages = {567-577},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2003
|
Kami, C; Iwata, N; Lagarias, J C; Yokota, A; Kohchi, T Light responses and characterization of phycocyanobilin (PCB)-phytochrome by using a transgenic Arabidopsis hy2 mutant Journal Article Plant and Cell Physiology, 44 , pp. S162, 2003. BibTeX @article{RID:121913175256-104b,
title = {Light responses and characterization of phycocyanobilin (PCB)-phytochrome by using a transgenic Arabidopsis hy2 mutant},
author = {C Kami and N Iwata and J C Lagarias and A Yokota and T Kohchi},
year = {2003},
date = {2003-01-01},
journal = {Plant and Cell Physiology},
volume = {44},
pages = {S162},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Franklin, K A; Linley, P J; Montgomery, B L; Lagarias, J C; Thomas, B; Jackson, S D; Terry, M J Misregulation of tetrapyrrole biosynthesis in transgenic tobacco seedlings expressing mammalian biliverdin reductase Journal Article Plant Journal, 35 (6), pp. 717-728, 2003. BibTeX @article{RID:121913175256-39b,
title = {Misregulation of tetrapyrrole biosynthesis in transgenic tobacco seedlings expressing mammalian biliverdin reductase},
author = {K A Franklin and P J Linley and B L Montgomery and J C Lagarias and B Thomas and S D Jackson and M J Terry},
year = {2003},
date = {2003-01-01},
journal = {Plant Journal},
volume = {35},
number = {6},
pages = {717-728},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
Frankenberg, N; Lagarias, J C Phycocyanobilin : Ferredoxin oxidoreductase of Anabaena sp PCC 7120 - Biochemical and spectroscopic characterization Journal Article Journal of Biological Chemistry, 278 (11), pp. 9219-9226, 2003. BibTeX @article{RID:121913175256-70b,
title = {Phycocyanobilin : Ferredoxin oxidoreductase of Anabaena sp PCC 7120 - Biochemical and spectroscopic characterization},
author = {N Frankenberg and J C Lagarias},
year = {2003},
date = {2003-01-01},
journal = {Journal of Biological Chemistry},
volume = {278},
number = {11},
pages = {9219-9226},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
